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I've decided to take a different approach, this one works so far!
[code]public class TextAnalysis {

public static void main(String[] args) throws Exception {
...

Thanks for the suggestion. It looks like it must be at the end of the file, because I can get it to print out whatever number I want before the "while (words.hasNext)" statements. I've figured out...

import java.io.File;
import java.util.Scanner;

import javax.swing.JFileChooser;
import javax.swing.JOptionPane;
import javax.swing.UIManager;

public class TextAnalysis {

public static...